takamouniverse.com

Alien fleet had one scout. After I did an alien merge, alien scout was at rear of alien fleet instead of the ships I merged into it. Opposite of normal merge.

Yes, this is due to the fact each ship in the fleet has to be moved from one empire ship records to another empires ship records. Can only be done one ship at a time and the ship is added to the fleet at the front instead of the rear. Not sure why it was done this way but it is correct.